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Name Category Image requires Type interaction level License/Openness has function has topic
Angle Helper Software Component Automated, Manual Free and open source Bioimage informatics
ANHIR: Automatic Non-rigid Histological Image Registration Dataset Logo
Animated overlay tutorial Software need a thumbnail Component Automated I do not know
Animation 3D Software Icy, Flying Camera Component Automated Free and open source Visualisation Imaging
Anisotropic Diffusion 2D Software Fiji Component Semi-automated Free and open source Smoothing Bioimage informatics
AnnotatorJ Software annotatorJ Fiji Component Manual, Semi-automated Free and open source Image annotation Machine learning
ANTs: Advanced Normalization Tools Software Advanced Normalization Tools ITK Collection Automated Free and open source Image registration, Affine registration, Rigid registration, Deformable registration, Image segmentation, Pixel classification, Illumination correction Bioimage informatics
Any volonteer to tag the Nature Methods Challenge paper Forum topic
APEER Software Collection, Component Commercial, Free and open source Analysis, Image segmentation, Cell segmentation, Model-based segmentation, Pixel classification, Annotation, Data handling, Image denoising Imaging, Microscopy, Machine learning
Aphelion Software need a thumbnail Collection Automated, Manual, Semi-automated Commercial Image analysis, Image processing Bioimage informatics
APP (All-path pruning) Software APP_Vaa3D_example_results Vaa3D Component Automated Free and open source Filament tracing, Image thresholding, Neuron image analysis Confocal microscopy
APP2 Software APP2_Vaa3D_example_Result Vaa3D Component Automated, Semi-automated Free and open source Filament tracing, Neuron image analysis, Distance transform Confocal microscopy
Aquiarium Software Functionalities Collection Automated Free and open source Image segmentation, Image correction, Chromatic aberration correction Fluorescence microscopy
Arabidopsis plants (high resolution) Dataset arabidopsis plant (high resolution)
Arabidopsis plants (low resolution) Dataset arabidopsis plant (low resolution)
Arabidopsis Seedlings Tool Software ImageJ toolbar of the arabidopsis seedlings tool ImageJ Workflow Automated Free and open source Image thresholding Bioimage informatics
Arabidopsis thaliana seedlings Dataset thumbnail of Arabidopsis thaliana seedlings
arivis Vision4D Software need a thumbnail Collection Automated, Manual, Semi-automated Commercial Image analysis, Image annotation, Data handling, Image processing, Image visualisation Bioimage informatics
Arrow Software need a thumbnail ImageJ, ICY Annotation, Arrow Component Semi-automated Free and open source Annotation Data sharing
Artemia color analysis Software Artemia color analysis toolset ImageJ Workflow Semi-automated Free and open source Object feature extraction Bioimage informatics