Neuron Tracing Vaa3D (App2)

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Type
Workflow
Author
Pavie, Benjamin
Requires
Vaa3D
APP2
Execution Platform
Linux
Mac
Windows
Programming Language
C++
Python
Supported image dimension
3D
Interaction Level
Automated
License/Openness
Free and open source
Description

Vaa3d All-Path-Pruning 2.0 (APP2) dockerised workflow for BIAFLOWS.

has function
Filament tracing
Neuron image analysis
has topic
Bioimage informatics
has biological terms
neuron
Additional keywords
Graph-based tracing
Entry Curator
lascholz
Post date
01/23/2020 - 16:35
Last modified
05/17/2023 - 19:43
Download Page
Neubias BIAFLOWS workflow of Neuron Tracking with Vaa3d APP2
Reference Publication Link
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning o…
has comparison
BIAFLOWS-PROBLEM: NEURON-TRACING-3D