Spot Detection 3D Hessian (ImageJ)

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Type
Workflow
Author
Tosi, Sebastien
Requires
ImageJ
FeatureJ Laplacian
ImageJ Built-in Macro Functions
FeatureJ Hessian
Execution Platform
Linux
Mac
Windows
Programming Language
ImageJ Macros
Supported image dimension
3D
Interaction Level
Automated
License/Openness
Free and open source
Description

3D spot detection using the Determinant of Hessian (DoH) and the detection of 3D minima.

has function
Spot detection
Feature enhancement
has topic
Bioimage informatics
has biological terms
spots
particles
Additional keywords
Laplacian
Hessian
Entry Curator
czhang
Post date
01/23/2020 - 13:53
Last modified
05/17/2023 - 20:25
Workflow steps
Step 1: Run FeatureJ Laplacian
FeatureJ Laplacian
Image feature detection
Step 2: Run FeatureJ Hessian
FeatureJ Hessian
Feature enhancement
Step 3: Invert image
ImageJ
Image processing
Step 4: 3D Maxima finder
3D ImageJ Suite
Object detection
Download Page
Neubias BIAFLOWS workflow of Spot Detection 3D Hessian with ImagJ
has comparison
BIAFLOWS-PROBLEM: SPOT-DETECTION-3D