color thresholding

Description

The Measure Rosette Area Tool allows to measure the area of the rosettes of arabidopsis plants.

See: http://dev.mri.cnrs.fr/projects/imagej-macros/wiki/Measure_Rosette_Area…

Example data: http://biii.eu/node/1146http://biii.eu/node/1145

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Description

The Arabidopsis Seedlings Tool allows to analyze the germination and seedling growth of Arabidopsis (Arabidopsis thaliana) in liquid culture. It measures the surface of green pixels per well in images containing multiple wells. It can be run in batch mode on a series of images. It writes a spreadsheet file with the measured area per well and saves a control image showing the green surface that has been detected per well. 

See http://dev.mri.cnrs.fr/projects/imagej-macros/wiki/Arabidopsis_Seedlings_Tool

Test images can be found here: http://biii.eu/node/1131

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ImageJ toolbar of the arabidopsis seedlings tool