cells

LIVECell

Submitted by Perrine on Tue, 03/28/2023 - 12:31

LIVECell is a manually annotated and expert-validated dataset of 2D phase contrast images, consisting of over 1.6 million cells from a diverse set of cell morphologies and culture densities. It is also associated with some trained models. All are published under CC BY-NC 4.0 license.

Nanotomy: Large-scale electron microscopy (EM) datasets

Submitted by Perrine on Tue, 03/14/2023 - 12:36

Nanotomy shares based on the ATLASTM browser-based viewer from Zeiss. This database allow to browse data set from the publications of Giepmans lab. 

The full list of data set is availble from :

nanotomy.org

Except the papers and where otherwise noted, this work is licensed under a Creative Commons Attribution 4.0 International License

 

Images can be downloaded but only as screenshots (saved as png).

Cell-IDR

Submitted by Perrine on Mon, 03/06/2023 - 16:40

The Image Data Resource (IDR) is a public repository of image datasets from published scientific studies, where the community can submit, search and access high-quality bio-image data. It is part of The BioImage Archive stores and distributes biological images that are useful to life-science researchers. Its development will provide data archiving services to the broader bioimaging database community. This includes added-value bioimaging data resources such as EMPIAR, Cell-IDR and Tissue-IDR.

CXIDB

Submitted by Perrine on Mon, 03/06/2023 - 16:10

The main goal of the Coherent X-ray Imaging Data Bank is to create an open repository for CXI experimental data.