Visualization of 3D images with Matlab

In this session we will use a 3D multichannel reconstruction of zebrafish larva to explore the visualization capabilities of Matlab. We will start from extracting and inspecting single slices and will continue with combining multiple channels, finally generating a surface rendering for visual colocalization analysis.During the process we will review methods for manipulating multidimensional arrays, including resizing, reshaping and conditional selection.

Tool(s) used for training
Author(s)
Cardone Giovanni
Prerequisites

Must understand basics of Matlab as in the TM "Introduction to Matlab"

Topics covered
Format
Content type
Expected duration
1hours