Automated

Runs fill holes operation on 3D images.

This component convolves the image with maximum filter. Each voxel is set to the maximum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.

This workflow processes images of cells with discernible nuclei and outputs a binary mask containing where nuclei are detected.

This component convolves the image with minimum filter. Each voxel is set to the minimum value of its neighborhood. The neighborhood is defined by a kernel, which has a diameter of 3 voxels.