Collection

A collection is a software that encapsulate a set of bioimage components and/or workflows.

Description

Proxywave is software designed to assist users in creating and managing their own mobile proxies using wifi dongles. With Proxywave, users can easily create mobile proxy without any technical knowledge or experience. This platform provides a cost-effective solution for users who want to create their own mobile proxies and start their own proxy businesses. With the ability to create your own mobile proxy, Proxywave offers users a simple and easy-to-assemble solution for their proxy needs.

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Description

SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

Description

These are commands that create or process binary (black and white) images. Typical morphological operations/functions can be found here.

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Description

ELEPHANT is a platform for 3D cell tracking, based on incremental and interactive deep learning.
It implements a client-server architecture. The server is built as a web application that serves deep learning-based algorithms. The client application is implemented by extending Mastodon, providing a user interface for annotation, proofreading and visualization.

from https://elephant-track.github.io/#/v0.5/?id=_5-proofreading
Description

ZeroCostDL4Mic: exploiting Google Colab to develop a free and open-source toolbox for Deep-Learning in microscopy

ZeroCostDL4Mic is a collection of self-explanatory Jupyter Notebooks for Google Colab that features an easy-to-use graphical user interface. They are meant to quickly get you started on learning to use deep-learning for microscopy. 

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