Object tracking

Synonyms
Tracking

EB1 tracking with IJ

Submitted by Perrine on Mon, 04/08/2019 - 11:00

We take an example image data of microtubule binding protein EB1, and will study how to automatically track those signals and how to analyze the tracking results. We use ImageJ for measuring the temporal changes in signal positions, and will feed the tracking results for analyzing their dynamics using Matlab in the following session EB1 tracking with Matlab.

Nuclei Tracking (ImageJ)

Workflow
has function
Object tracking
need a thumbnail

Aivia - Aivia Cloud - Aivia Web

Collection
Workflow
has topic
Machine learning
has function
Analysis
Frequency analysis
Image analysis
Colocalisation analysis
Object-based colocalisation
Pixel-based colocalisation
Filament tracing
Image feature detection
Image segmentation
Cell segmentation
Pixel classification
Neuron image analysis
Object classification
Object counting
Texture extraction
Object tracking
Cell tracking
Particle tracking
Annotation
Classification
Editing
Image deconvolution
Visualisation
Image visualisation
Volume rendering
Plotting

Manual tracking with TrackMate

Component
Description

Manual tracking using Trackmate plugin (comes with FIji, so no installation required if you are using Fiji). 

has function
Object tracking

Tracking2.0

Component
Description

This method was originally designed to track objects (not necessarily spots) already identified in 2D 
frames and has been applied previously to particle tracking and analysis in high-speed atomic force microscopy image series.

 

has topic
Bioimage informatics
has function
Object tracking
Particle tracking
need a thumbnail
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