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Name Category Image requires Type interaction level License/Openness has function has topic
Daybook2 Software Collection Semi-automated Commercial Fluorescence microscopy
DBSCAN clustering using PALMsiever Software need a thumbnail PALMsiever Workflow Automated I do not know Cell segmentation Single molecule localization microscopy
Debleach Software need a thumbnail Component Automated Free and open source Image correction Fluorescence microscopy
Deconstructing co-localisation workflows: from co-expression assessment to super-resolved co-distribution analysis Training Material
DeconvolutionLab Software need a thumbnail ImageJ Component Automated Free and open source
DeconvolutionLab2 Software ImageJ Collection, Component Automated Free and open source Image deconvolution Microscopy
Deep Learning from scratch Training Material
DeepCell Software deepcell Tensorflow, Keras Component Automated, Semi-automated Free and open source Cell segmentation, Cell tracking, Morphological operation Fluorescence microscopy, Phase contrast microscopy
DeepCLEM Software F1000R Figure 1 DeepCLEM Fiji, Register Virtual Stack Slices (Fiji), CSBDeep a toolbox for Content-aware Image Restoration (CARE) in Fiji Component, Workflow Automated Free and open source Image registration, Affine transformation Correlative Light and Electron Microscopy, Multimodal imaging
DeepImageJ Software deepImageJ ImageJ, Tensorflow Component Free and open source Cell segmentation, Image denoising Machine learning
DEFCoN-ImageJ Software Fiji Component Semi-automated Free and open source Spot detection, Object counting Machine learning
DefineGrid Software CellProfiler Component Automated Free and open source
Definiens Developer Software need a thumbnail Collection Automated Commercial
Delaunay Voronoi Software Fiji Component Semi-automated Free and open source, I do not know Bioimage informatics
Delayed Snapshot Software need a thumbnail ImageJ, Fiji Component Semi-automated Free and open source Bioimage informatics
DensitoQuant Software Collection Automated Commercial Image analysis, Image feature detection Bioimage informatics, Digital histology
Detection of Molecules - DoM Software ImageJ Collection Manual, Semi-automated Free and open source Single molecule localisation, Chromatic aberration correction, Drift correction Super-resolution microscopy
Developing for ImageJ and Friends Training Material
DeXtrusion Software DeXtrusion probability map Component Semi-automated Free and open source Image feature detection, Annotation Fluorescence microscopy
Diadem challenge Dataset Diadem challenge